Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMM33912.1Short-chain dehydrogenase. (259 aa)    
Predicted Functional Partners:
AMM31861.1
Pfam:pfam00106 short chain dehydrogenase.
  
     0.506
AMM33911.1
Hypothetical protein.
       0.501
AMM33910.1
Hypothetical protein; Pfam:pfam00106 short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
 
 0.495
AMM33913.1
Pfam:pfam03807 NADP oxidoreductase coenzyme F420-dependent.
       0.494
AMM34354.1
Short-chain dehydrogenase/reductase SDR; Pfam:pfam00106 short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
     0.492
AMM31128.1
Pfam:pfam00106 short chain dehydrogenase.
  
     0.437
AMM32563.1
Pfam:pfam02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain.
  
 0.434
AMM34730.1
ABC transporter substrate-binding protein.
   
 0.434
AMM31612.1
Hypothetical protein; Pfam:pfam12796 Ankyrin repeats (3 copies).
   
 0.409
AMM33725.1
Ankyrin repeat-containing protein; Pfam:pfam12796 Ankyrin repeats (3 copies).
   
 0.409
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
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