STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMM33956.1Pfam:pfam14029 Protein of unknown function (DUF4244). (69 aa)    
Predicted Functional Partners:
AMM33954.1
Hypothetical protein.
     
 0.863
AMM33955.1
Hypothetical protein.
       0.841
AMM32288.1
Hypothetical protein.
  
     0.698
AMM33187.1
Hypothetical protein.
  
     0.574
AMM33338.1
Pfam:pfam01636 Phosphotransferase enzyme family.
  
     0.519
AMM33190.1
Pfam:pfam12695 Alpha/beta hydrolase family.
  
     0.477
AMM33835.1
Pfam:pfam01569 PAP2 superfamily.
  
     0.443
AMM33266.1
Pilus assembly protein TadE.
 
    0.437
rpsD
30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.
  
     0.434
AMM31002.1
Hypothetical protein.
  
     0.431
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.