Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMM34000.1Pfam:pfam01261 Xylose isomerase-like TIM barrel; Belongs to the hyi family. (263 aa)    
Predicted Functional Partners:
AMM34001.1
Tartronate semialdehyde reductase; Pfam:pfam03446 NAD binding domain of 6-phosphogluconate dehydrogenase.
 
 0.992
AMM34002.1
Glyoxylate carboligase; Pfam:pfam02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Belongs to the TPP enzyme family.
 
 
 0.988
AMM33871.1
Pfam:pfam00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain.
  
 
 0.911
AMM34390.1
Pfam:pfam00266 Aminotransferase class-V.
    
  0.900
AMM34008.1
Uricase; Catalyzes the oxidation of uric acid to 5-hydroxyisourate, which is further processed to form (S)-allantoin.
 
     0.677
AMM34004.1
Allantoicase; Pfam:pfam13594 Amidohydrolase.
 
  
 0.668
AMM34006.1
Pfam:pfam09349 OHCU decarboxylase.
 
     0.606
AMM33997.1
Aldolase.
  
    0.558
AMM31028.1
Oxidoreductase; Pfam:pfam03446 NAD binding domain of 6-phosphogluconate dehydrogenase.
  
 0.522
AMM34007.1
5-hydroxyisourate hydrolase; Pfam:pfam00576 HIUase/Transthyretin family; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.
 
     0.515
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
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