Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AMM34025.1Hypothetical protein; Pfam:pfam13490 Putative zinc-finger. (238 aa)    
Predicted Functional Partners:
AMM34026.1
Putative RNA polymerase ECF-subfamily sigma factor; Pfam:pfam04545 Sigma-70, region 4; Belongs to the sigma-70 factor family. ECF subfamily.
 
 
 0.996
AMM33825.1
Drug:proton antiporter; Pfam:pfam01494 FAD binding domain.
   
  
 0.587
AMM34027.1
Hypothetical protein.
       0.549
AMM30886.1
RNA polymerase sigma factor SigK; Pfam:pfam04542 Sigma-70 region 2; Belongs to the sigma-70 factor family. ECF subfamily.
  
 
 0.541
AMM31181.1
Pfam:pfam04545 Sigma-70, region 4; Belongs to the sigma-70 factor family. ECF subfamily.
  
 
 0.486
AMM31238.1
Pfam:pfam04545 Sigma-70, region 4; Belongs to the sigma-70 factor family. ECF subfamily.
  
 
 0.486
AMM31301.1
RNA polymerase sigma factor, sigma-70 family; Pfam:pfam04542 Sigma-70 region 2; Belongs to the sigma-70 factor family.
  
 
 0.486
AMM31306.1
Putative RNA polymerase sigma (70) factor; Pfam:pfam08281 Sigma-70, region 4; Belongs to the sigma-70 factor family. ECF subfamily.
  
 
 0.486
AMM32767.1
Hypothetical protein; Pfam:pfam10646 Sporulation and spore germination.
  
 
 0.486
AMM33191.1
ATP/GTP-binding protein.
  
 
 0.486
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
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