Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AMM34113.1Hypothetical protein. (87 aa)    
Predicted Functional Partners:
AMM34112.1
Pfam:pfam08240 Alcohol dehydrogenase GroES-like domain.
  
 0.991
AMM34114.1
Pfam:pfam00753 Metallo-beta-lactamase superfamily.
  
 0.894
AMM33827.1
Pfam:pfam08240 Alcohol dehydrogenase GroES-like domain.
 
 
  
 0.874
AMM32876.1
Zn-dependent hydrolase; Pfam:pfam00753 Metallo-beta-lactamase superfamily.
  
 0.792
AMM33510.1
Pfam:pfam00756 Putative esterase.
  
 
 0.760
AMM34651.1
Pfam:pfam00465 Iron-containing alcohol dehydrogenase.
   
 
 0.617
AMM34675.1
RicR protein; Pfam:pfam02583 Metal-sensitive transcriptional repressor.
  
  
 0.553
AMM30752.1
Cytoplasmic protein; Pfam:pfam02583 Metal-sensitive transcriptional repressor.
  
  
 0.548
AMM33595.1
Hypothetical protein; Pfam:pfam02583 Metal-sensitive transcriptional repressor.
  
  
 0.548
AMM33929.1
Hypothetical protein; Pfam:pfam08240 Alcohol dehydrogenase GroES-like domain.
 
 
  
 0.538
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
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