Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AMM34114.1Pfam:pfam00753 Metallo-beta-lactamase superfamily. (187 aa)    
Predicted Functional Partners:
AMM34113.1
Hypothetical protein.
  
 0.894
AMM34112.1
Pfam:pfam08240 Alcohol dehydrogenase GroES-like domain.
   0.710
AMM34115.1
Pfam:pfam01614 Bacterial transcriptional regulator.
       0.664
AMM32875.1
Pfam:pfam00107 Zinc-binding dehydrogenase.
  
 0.588
AMM34111.1
Pfam:pfam00196 Bacterial regulatory proteins, luxR family.
 
     0.484
AMM33594.1
Beta-lactamase; Pfam:pfam00581 Rhodanese-like domain.
 
 
 0.407
AMM31815.1
Ferredoxin; Pfam:pfam01571 Aminomethyltransferase folate-binding domain.
  
 0.400
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
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