STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMM34145.1Dihydroxyacetone kinase; Pfam:pfam02733 Dak1 domain. (581 aa)    
Predicted Functional Partners:
AMM30988.1
PTS sugar transporter subunit IIA; Pfam:pfam03610 PTS system fructose IIA component.
 
 
 0.876
AMM34146.1
Pfam:pfam02502 Ribose/Galactose Isomerase.
 
  
 0.855
AMM30857.1
Hypothetical protein; Pfam:pfam04198 Putative sugar-binding domain.
     0.689
AMM34671.1
Transcriptional regulator.
   
 
 0.688
AMM34144.1
Short-chain dehydrogenase; Pfam:pfam13561 Enoyl-(Acyl carrier protein) reductase.
  
   0.684
AMM34077.1
Pfam:pfam01261 Xylose isomerase-like TIM barrel.
     0.598
AMM34143.1
Pfam:pfam01261 Xylose isomerase-like TIM barrel.
       0.571
AMM34071.1
Pfam:pfam00121 Triosephosphate isomerase.
 
  
 0.428
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.