STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMM34153.1Permease, MFS-type; Pfam:pfam00083 Sugar (and other) transporter. (420 aa)    
Predicted Functional Partners:
AMM34152.1
Pfam:pfam07286 Protein of unknown function (DUF1445); Belongs to the D-glutamate cyclase family.
 
    0.782
AMM34373.1
MFS transporter; Pfam:pfam00083 Sugar (and other) transporter.
  
     0.718
AMM31594.1
MFS transporter; Pfam:pfam07690 Major Facilitator Superfamily.
 
    0.596
AMM34068.1
Pfam:pfam07690 Major Facilitator Superfamily.
 
    0.596
pxpA-2
Hypothetical protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.
  
    0.519
AMM34155.1
Urea amidolyase; Pfam:pfam02626 Allophanate hydrolase subunit 2.
  
    0.514
AMM32009.1
Putative 2-ketogluconate transporter; Pfam:pfam07690 Major Facilitator Superfamily.
 
    0.509
AMM34156.1
acetyl-COA carboxylase; Pfam:pfam02786 Carbamoyl-phosphate synthase L chain, ATP binding domain.
       0.475
AMM31656.1
MFS transporter, phthalate permease family; Pfam:pfam07690 Major Facilitator Superfamily.
 
    0.417
AMM34157.1
Pfam:pfam00392 Bacterial regulatory proteins, gntR family.
       0.411
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
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