STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
AMM34222.1Hypothetical protein; Pfam:pfam02515 CoA-transferase family III; Belongs to the CoA-transferase III family. (414 aa)    
Predicted Functional Partners:
AMM34221.1
Pfam:pfam00202 Aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
  
 0.799
AMM34223.1
Pfam:pfam02771 Acyl-CoA dehydrogenase, N-terminal domain.
 
 0.647
AMM34220.1
Pfam:pfam07905 Purine catabolism regulatory protein-like family.
       0.537
AMM31339.1
Acetolactate synthase large subunit; Pfam:pfam02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Belongs to the TPP enzyme family.
 
 
 0.480
AMM34224.1
Pfam:pfam00171 Aldehyde dehydrogenase family.
   
   0.442
AMM33872.1
hydroxymethylglutaryl-CoA lyase; Pfam:pfam00682 HMGL-like.
 
 0.431
AMM32925.1
Pfam:pfam02771 Acyl-CoA dehydrogenase, N-terminal domain.
 
 0.415
AMM31855.1
Acetolactate synthase; Pfam:pfam02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Belongs to the TPP enzyme family.
  
 
 0.407
AMM33109.1
Acetolactate synthase; Pfam:pfam02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain.
  
 
 0.407
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
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