Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMM34225.1Transporter; Pfam:pfam13520 Amino acid permease. (428 aa)    
Predicted Functional Partners:
AMM34227.1
Pfam:pfam07722 Peptidase C26.
  
  
 0.797
AMM34226.1
3-hydroxyisobutyryl-CoA hydrolase; Pfam:pfam13766 2-enoyl-CoA Hydratase C-terminal region.
   
   0.785
AMM34228.1
Pfam:pfam13410 Glutathione S-transferase, C-terminal domain.
  
    0.782
AMM34231.1
ABC transporter substrate-binding protein; Pfam:pfam00497 Bacterial extracellular solute-binding proteins, family 3.
     
 0.712
AMM34229.1
Polar amino acid ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
     
 0.710
AMM34230.1
Amino acid ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
     
 0.710
AMM34193.1
Pfam:pfam13520 Amino acid permease.
  
     0.646
AMM34232.1
Acetylornithine deacetylase; Pfam:pfam01546 Peptidase family M20/M25/M40.
       0.466
AMM34730.1
ABC transporter substrate-binding protein.
    
 0.422
AMM31157.1
Trehalose synthase; Pfam:pfam00128 Alpha amylase, catalytic domain.
  
  0.421
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
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