STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMM34230.1Amino acid ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component. (215 aa)    
Predicted Functional Partners:
AMM34231.1
ABC transporter substrate-binding protein; Pfam:pfam00497 Bacterial extracellular solute-binding proteins, family 3.
 0.997
AMM33389.1
ABC transporter substrate-binding protein; Pfam:pfam00497 Bacterial extracellular solute-binding proteins, family 3.
 0.991
AMM31673.1
ABC transporter substrate-binding protein; Pfam:pfam00497 Bacterial extracellular solute-binding proteins, family 3.
 
 0.931
AMM31503.1
Pfam:pfam00005 ABC transporter.
 
 0.923
AMM33388.1
Glutamate ABC transporter ATP-binding protein; Pfam:pfam00005 ABC transporter.
 
 0.923
AMM33829.1
Pfam:pfam00005 ABC transporter.
 
 0.921
AMM31671.1
Pfam:pfam00005 ABC transporter.
 
 0.920
AMM33345.1
Putative ABC transporter ATP-binding protein; Pfam:pfam00005 ABC transporter.
 
 0.920
AMM33894.1
ABC transporter, ATP-binding protein; Pfam:pfam00005 ABC transporter.
 
 0.920
AMM33390.1
Amino acid ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
  
  
 
0.915
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
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