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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMM34245.1LacI family transcriptional regulator; Pfam:pfam13377 Periplasmic binding protein-like domain. (336 aa)    
Predicted Functional Partners:
AMM32601.1
Glutamate synthase; Pfam:pfam01645 Conserved region in glutamate synthase.
    
 
 0.706
AMM34246.1
Pfam:pfam02614 Glucuronate isomerase.
 
  
 0.634
AMM34243.1
Altronate oxidoreductase; Pfam:pfam08125 Mannitol dehydrogenase C-terminal domain.
  
  
 0.566
AMM34244.1
Pfam:pfam04295 D-galactarate dehydratase / Altronate hydrolase, C terminus.
       0.544
AMM31039.1
HPr family phosphocarrier protein; Pfam:pfam00381 PTS HPr component phosphorylation site.
   
 
 0.474
AMM34247.1
Sugar (Glycoside-Pentoside-Hexuronide) transporter; Pfam:pfam13347 MFS/sugar transport protein.
     
 0.467
AMM31041.1
PTS lactose transporter subunit IIC; Pfam:pfam00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2.
     
 0.408
gluQ
Glutamyl-Q tRNA(Asp) synthetase; Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5-dihydroxy-2- cyclopenten-1-yl) moiety of the queuosine in the wobble position of the QUC anticodon; Belongs to the class-I aminoacyl-tRNA synthetase family. GluQ subfamily.
  
   0.405
AMM34249.1
Pfam:pfam00294 pfkB family carbohydrate kinase.
  
  
 0.400
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
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