STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMM34272.1ATP/GTP-binding protein; Pfam:pfam15617 C-C_Bond_Lyase of the TIM-Barrel fold. (392 aa)    
Predicted Functional Partners:
AMM34273.1
Phosphoribosyltransferase; Pfam:pfam11202 Phosphoribosyl transferase (PRTase).
 
   
 0.963
AMM34270.1
Hypothetical protein; Pfam:pfam02342 TerD domain.
 
     0.894
AMM34263.1
Stress protein; Pfam:pfam02342 TerD domain.
 
     0.835
AMM34262.1
Pfam:pfam04332 Protein of unknown function (DUF475).
 
   
 0.802
AMM34264.1
Chemical-damaging agent resistance protein C; Pfam:pfam02342 TerD domain.
 
     0.790
AMM34265.1
Chemical-damaging agent resistance protein C; Pfam:pfam02342 TerD domain.
 
     0.790
AMM34271.1
Hypothetical protein.
       0.550
AMM34269.1
Hypothetical protein.
       0.549
AMM31041.1
PTS lactose transporter subunit IIC; Pfam:pfam00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2.
  
  
 0.512
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
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