STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMM34274.1Pfam:pfam00296 Luciferase-like monooxygenase. (327 aa)    
Predicted Functional Partners:
AMM32388.1
MFS transporter; Pfam:pfam07690 Major Facilitator Superfamily.
  
     0.463
AMM34275.1
Hypothetical protein.
       0.462
AMM32396.1
Amino acid adenylation protein; Pfam:pfam00501 AMP-binding enzyme.
   
 
 0.457
AMM31194.1
Flavin reductase; Pfam:pfam03358 NADPH-dependent FMN reductase.
 
 
 0.444
AMM34592.1
MFS transporter; Pfam:pfam07690 Major Facilitator Superfamily.
  
     0.442
AMM34242.1
Luciferase; Pfam:pfam00296 Luciferase-like monooxygenase.
    0.427
AMM33349.1
Luciferase; Pfam:pfam00296 Luciferase-like monooxygenase.
    0.421
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
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