STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMM34328.1Pfam:pfam00293 NUDIX domain. (232 aa)    
Predicted Functional Partners:
AMM31268.1
Zn-dependent hydrolase; Pfam:pfam00753 Metallo-beta-lactamase superfamily.
 
     0.675
AMM34329.1
Epimerase; Pfam:pfam01370 NAD dependent epimerase/dehydratase family.
  
    0.573
AMM33976.1
NUDIX hydrolase.
  
     0.571
AMM30788.1
Pfam:pfam13350 Tyrosine phosphatase family.
 
     0.515
AMM31815.1
Ferredoxin; Pfam:pfam01571 Aminomethyltransferase folate-binding domain.
  
 0.491
AMM34327.1
Hypothetical protein; Pfam:pfam00082 Subtilase family.
       0.489
AMM31156.1
Assimilatory nitrite reductase subunit; Pfam:pfam07992 Pyridine nucleotide-disulphide oxidoreductase.
   
 0.459
AMM32923.1
MaoC family dehydratase; Pfam:pfam01575 MaoC like domain.
 
    0.421
AMM31176.1
Putative MaoC-like domain protein; Pfam:pfam01575 MaoC like domain.
 
    0.406
AMM34575.1
FAD-binding protein; Pfam:pfam00890 FAD binding domain.
  
    0.405
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
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