Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMM34448.1NAD-dependent dehydratase. (209 aa)    
Predicted Functional Partners:
AMM34447.1
PF06545 family protein; Pfam:pfam06545 Protein of unknown function (DUF1116).
       0.773
AMM34449.1
Pfam:pfam01370 NAD dependent epimerase/dehydratase family.
       0.752
AMM34450.1
Rieske (2Fe-2S) domain-containing protein; Pfam:pfam00848 Ring hydroxylating alpha subunit (catalytic domain).
       0.568
AMM34446.1
Transcriptional regulator, XRE family; Pfam:pfam07883 Cupin domain.
       0.510
AMM34451.1
Hypothetical protein; Pfam:pfam01425 Amidase.
       0.404
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
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