Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMM34456.1Cro/Cl family transcriptional regulator; Pfam:pfam13443 Cro/C1-type HTH DNA-binding domain. (112 aa)    
Predicted Functional Partners:
AMM34455.1
Site-specific recombinase XerD; Pfam:pfam00589 Phage integrase family; Belongs to the 'phage' integrase family.
 
   
 0.951
AMM34457.1
Recombinase XerD.
 
     0.895
AMM31492.1
Integrase; Pfam:pfam00589 Phage integrase family; Belongs to the 'phage' integrase family.
 
   
 0.795
AMM31494.1
Hypothetical protein.
 
     0.789
AMM32214.1
Pfam:pfam00440 Bacterial regulatory proteins, tetR family.
  
     0.476
AMM30733.1
Hypothetical protein.
  
     0.467
AMM33534.1
Hypothetical protein; Pfam:pfam13632 Glycosyl transferase family group 2.
  
    0.408
AMM34408.1
Putative CobQ/CobB/MinD/ParA nucleotide binding protein; Pfam:pfam13614 AAA domain.
  
     0.403
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
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