Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AMM30733.1 | AMM34456.1 | SA2016_0028 | SA2016_3799 | Hypothetical protein. | Cro/Cl family transcriptional regulator; Pfam:pfam13443 Cro/C1-type HTH DNA-binding domain. | 0.467 |
AMM30733.1 | AMM34457.1 | SA2016_0028 | SA2016_3800 | Hypothetical protein. | Recombinase XerD. | 0.510 |
AMM31492.1 | AMM31493.1 | SA2016_0804 | SA2016_0805 | Integrase; Pfam:pfam00589 Phage integrase family; Belongs to the 'phage' integrase family. | XRE family transcriptional regulator; Pfam:pfam13443 Cro/C1-type HTH DNA-binding domain. | 0.952 |
AMM31492.1 | AMM34456.1 | SA2016_0804 | SA2016_3799 | Integrase; Pfam:pfam00589 Phage integrase family; Belongs to the 'phage' integrase family. | Cro/Cl family transcriptional regulator; Pfam:pfam13443 Cro/C1-type HTH DNA-binding domain. | 0.796 |
AMM31492.1 | AMM34457.1 | SA2016_0804 | SA2016_3800 | Integrase; Pfam:pfam00589 Phage integrase family; Belongs to the 'phage' integrase family. | Recombinase XerD. | 0.789 |
AMM31493.1 | AMM31492.1 | SA2016_0805 | SA2016_0804 | XRE family transcriptional regulator; Pfam:pfam13443 Cro/C1-type HTH DNA-binding domain. | Integrase; Pfam:pfam00589 Phage integrase family; Belongs to the 'phage' integrase family. | 0.952 |
AMM31493.1 | AMM34455.1 | SA2016_0805 | SA2016_3798 | XRE family transcriptional regulator; Pfam:pfam13443 Cro/C1-type HTH DNA-binding domain. | Site-specific recombinase XerD; Pfam:pfam00589 Phage integrase family; Belongs to the 'phage' integrase family. | 0.797 |
AMM31493.1 | AMM34457.1 | SA2016_0805 | SA2016_3800 | XRE family transcriptional regulator; Pfam:pfam13443 Cro/C1-type HTH DNA-binding domain. | Recombinase XerD. | 0.789 |
AMM32214.1 | AMM34456.1 | SA2016_1537 | SA2016_3799 | Pfam:pfam00440 Bacterial regulatory proteins, tetR family. | Cro/Cl family transcriptional regulator; Pfam:pfam13443 Cro/C1-type HTH DNA-binding domain. | 0.476 |
AMM32214.1 | AMM34457.1 | SA2016_1537 | SA2016_3800 | Pfam:pfam00440 Bacterial regulatory proteins, tetR family. | Recombinase XerD. | 0.446 |
AMM34455.1 | AMM31493.1 | SA2016_3798 | SA2016_0805 | Site-specific recombinase XerD; Pfam:pfam00589 Phage integrase family; Belongs to the 'phage' integrase family. | XRE family transcriptional regulator; Pfam:pfam13443 Cro/C1-type HTH DNA-binding domain. | 0.797 |
AMM34455.1 | AMM34456.1 | SA2016_3798 | SA2016_3799 | Site-specific recombinase XerD; Pfam:pfam00589 Phage integrase family; Belongs to the 'phage' integrase family. | Cro/Cl family transcriptional regulator; Pfam:pfam13443 Cro/C1-type HTH DNA-binding domain. | 0.952 |
AMM34455.1 | AMM34457.1 | SA2016_3798 | SA2016_3800 | Site-specific recombinase XerD; Pfam:pfam00589 Phage integrase family; Belongs to the 'phage' integrase family. | Recombinase XerD. | 0.899 |
AMM34456.1 | AMM30733.1 | SA2016_3799 | SA2016_0028 | Cro/Cl family transcriptional regulator; Pfam:pfam13443 Cro/C1-type HTH DNA-binding domain. | Hypothetical protein. | 0.467 |
AMM34456.1 | AMM31492.1 | SA2016_3799 | SA2016_0804 | Cro/Cl family transcriptional regulator; Pfam:pfam13443 Cro/C1-type HTH DNA-binding domain. | Integrase; Pfam:pfam00589 Phage integrase family; Belongs to the 'phage' integrase family. | 0.796 |
AMM34456.1 | AMM32214.1 | SA2016_3799 | SA2016_1537 | Cro/Cl family transcriptional regulator; Pfam:pfam13443 Cro/C1-type HTH DNA-binding domain. | Pfam:pfam00440 Bacterial regulatory proteins, tetR family. | 0.476 |
AMM34456.1 | AMM34455.1 | SA2016_3799 | SA2016_3798 | Cro/Cl family transcriptional regulator; Pfam:pfam13443 Cro/C1-type HTH DNA-binding domain. | Site-specific recombinase XerD; Pfam:pfam00589 Phage integrase family; Belongs to the 'phage' integrase family. | 0.952 |
AMM34456.1 | AMM34457.1 | SA2016_3799 | SA2016_3800 | Cro/Cl family transcriptional regulator; Pfam:pfam13443 Cro/C1-type HTH DNA-binding domain. | Recombinase XerD. | 0.896 |
AMM34457.1 | AMM30733.1 | SA2016_3800 | SA2016_0028 | Recombinase XerD. | Hypothetical protein. | 0.510 |
AMM34457.1 | AMM31492.1 | SA2016_3800 | SA2016_0804 | Recombinase XerD. | Integrase; Pfam:pfam00589 Phage integrase family; Belongs to the 'phage' integrase family. | 0.789 |
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