STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMM34465.1Hypothetical protein; Pfam:pfam03328 HpcH/HpaI aldolase/citrate lyase family; Belongs to the HpcH/HpaI aldolase family. (241 aa)    
Predicted Functional Partners:
AMM33149.1
2-keto-4-pentenoate hydratase; Pfam:pfam01557 Fumarylacetoacetate (FAA) hydrolase family.
 
  
 0.830
AMM34464.1
Transcriptional regulator; Pfam:pfam07883 Cupin domain.
  
    0.793
AMM31950.1
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; Pfam:pfam03328 HpcH/HpaI aldolase/citrate lyase family; Belongs to the HpcH/HpaI aldolase family.
  
     0.775
AMM31954.1
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; Pfam:pfam03328 HpcH/HpaI aldolase/citrate lyase family; Belongs to the HpcH/HpaI aldolase family.
  
     0.775
AMM30768.1
Aldolase; Pfam:pfam03328 HpcH/HpaI aldolase/citrate lyase family; Belongs to the HpcH/HpaI aldolase family.
  
     0.774
AMM34463.1
Hypothetical protein; Pfam:pfam01177 Asp/Glu/Hydantoin racemase.
       0.773
AMM34466.1
Hypothetical protein; Pfam:pfam07883 Cupin domain.
  
    0.668
AMM34467.1
Chitin deacetylase; Pfam:pfam01522 Polysaccharide deacetylase.
  
    0.642
AMM34468.1
Hypothetical protein; Pfam:pfam00753 Metallo-beta-lactamase superfamily.
       0.514
AMM34469.1
Hypothetical protein.
       0.514
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
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