Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMM34490.1Pfam:pfam00440 Bacterial regulatory proteins, tetR family. (214 aa)    
Predicted Functional Partners:
AMM34488.1
Putative sulfonate ABC transporter, solute-binding protein; Pfam:pfam09084 NMT1/THI5 like.
 
     0.741
AMM34492.1
Putative formylglycine-generating enzyme; Pfam:pfam03781 Sulfatase-modifying factor enzyme 1.
 
   
 0.603
AMM34489.1
Amidohydrolase; Pfam:pfam07969 Amidohydrolase family.
 
     0.572
AMM34491.1
Hypothetical protein.
  
    0.561
AMM34484.1
Putative sulfatase family protein; Pfam:pfam00884 Sulfatase.
 
   
 0.522
AMM34564.1
Pfam:pfam01261 Xylose isomerase-like TIM barrel.
  
     0.515
AMM34487.1
Nitrate ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
 
     0.495
AMM34143.1
Pfam:pfam01261 Xylose isomerase-like TIM barrel.
  
     0.493
AMM34493.1
Membrane protein; Pfam:pfam02656 Domain of unknown function (DUF202).
       0.482
AMM34494.1
Membrane protein.
       0.482
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
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