STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMM34654.1Glycine/betaine ABC transporter substrate-binding protein; Pfam:pfam04069 Substrate binding domain of ABC-type glycine betaine transport system. (314 aa)    
Predicted Functional Partners:
AMM33430.1
ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
 
 0.998
AMM33432.1
Pfam:pfam00005 ABC transporter.
 0.991
AMM33431.1
ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
 
 0.990
AMM33429.1
Glycine/betaine ABC transporter substrate-binding protein; Pfam:pfam04069 Substrate binding domain of ABC-type glycine betaine transport system.
  
  
 
0.902
AMM33376.1
Hypothetical protein; Pfam:pfam09770 Topoisomerase II-associated protein PAT1.
  
    0.736
AMM34655.1
ArsR family transcriptional regulator; Pfam:pfam00581 Rhodanese-like domain.
       0.485
AMM34653.1
Oxidoreductase; Pfam:pfam01565 FAD binding domain.
  
    0.483
AMM33491.1
Photosystem reaction center subunit H; Pfam:pfam09557 Domain of unknown function (DUF2382).
  
    0.478
AMM33492.1
Hypothetical protein; Pfam:pfam05239 PRC-barrel domain.
  
    0.478
AMM33775.1
Photosystem reaction center subunit H; Pfam:pfam04652 Vta1 like.
  
    0.478
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
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