STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMM34675.1RicR protein; Pfam:pfam02583 Metal-sensitive transcriptional repressor. (136 aa)    
Predicted Functional Partners:
AMM34676.1
Pfam:pfam00403 Heavy-metal-associated domain.
 
  
 0.838
AMM34677.1
Carbonate dehydratase; Pfam:pfam00122 E1-E2 ATPase.
 
  
 0.800
AMM33510.1
Pfam:pfam00756 Putative esterase.
  
  
 0.568
AMM31895.1
Pfam:pfam08240 Alcohol dehydrogenase GroES-like domain.
  
  
 0.532
AMM32875.1
Pfam:pfam00107 Zinc-binding dehydrogenase.
  
  
 0.532
AMM32924.1
Pfam:pfam08240 Alcohol dehydrogenase GroES-like domain.
  
  
 0.532
AMM34113.1
Hypothetical protein.
  
  
 0.532
AMM34297.1
ATPase; Pfam:pfam00122 E1-E2 ATPase.
 
  
 0.523
AMM30752.1
Cytoplasmic protein; Pfam:pfam02583 Metal-sensitive transcriptional repressor.
  
   
 0.503
AMM32038.1
Cadmium, zinc and cobalt-transporting ATPase; Pfam:pfam00122 E1-E2 ATPase.
  
  
 0.436
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
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