STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMM34678.1Membrane protein; Pfam:pfam00892 EamA-like transporter family. (335 aa)    
Predicted Functional Partners:
AMM34679.1
Pfam:pfam07336 Protein of unknown function (DUF1470).
 
   
 0.930
AMM34713.1
Membrane protein; Pfam:pfam07690 Major Facilitator Superfamily.
  
     0.520
AMM31295.1
Transporter, CPA2 family; Pfam:pfam00999 Sodium/hydrogen exchanger family.
 
  
 0.517
AMM33750.1
Pfam:pfam07690 Major Facilitator Superfamily.
  
     0.501
AMM32554.1
Hypothetical protein.
  
     0.453
AMM34257.1
Lipase; Pfam:pfam13472 GDSL-like Lipase/Acylhydrolase family.
 
     0.434
AMM34722.1
Pfam:pfam00005 ABC transporter.
  
   0.421
AMM32691.1
HNH endonuclease; Pfam:pfam02720 Domain of unknown function (DUF222).
 
     0.417
AMM33408.1
Transcriptional regulator, ArsR family; Pfam:pfam12840 Helix-turn-helix domain.
 
   
 0.410
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
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