STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMM34700.1Histidine kinase; Pfam:pfam13185 GAF domain. (238 aa)    
Predicted Functional Partners:
AMM34699.1
Hypothetical protein.
     
 0.799
AMM33923.1
Hypothetical protein; Pfam:pfam03861 ANTAR domain.
 
     0.695
AMM33015.1
Peroxiredoxin; Pfam:pfam02566 OsmC-like protein.
  
    0.504
AMM34318.1
Hypothetical protein; Pfam:pfam03473 MOSC domain.
  
     0.502
AMM33801.1
TetR family transcriptional regulator.
  
 
   0.467
AMM32956.1
Peptidase C60 sortase A and B; Pfam:pfam04203 Sortase family.
  
     0.461
AMM31137.1
Hypothetical protein; Pfam:pfam04203 Sortase family.
  
     0.453
AMM32517.1
Peroxiredoxin; Pfam:pfam02566 OsmC-like protein.
   
    0.440
AMM34698.1
Hypothetical protein.
 
     0.428
leuS
Pfam:pfam13603 Leucyl-tRNA synthetase, Domain 2; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
   0.405
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
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