Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMM34712.1Phosphoesterase, PA-phosphatase related protein; Pfam:pfam01569 PAP2 superfamily. (511 aa)    
Predicted Functional Partners:
AMM34713.1
Membrane protein; Pfam:pfam07690 Major Facilitator Superfamily.
       0.768
AMM33844.1
Glutamate decarboxylase; Pfam:pfam00282 Pyridoxal-dependent decarboxylase conserved domain; Belongs to the group II decarboxylase family.
  
 
 0.633
AMM31446.1
Pfam:pfam00067 Cytochrome P450.
  
 0.549
AMM34514.1
Pfam:pfam00067 Cytochrome P450.
  
 0.549
kbl
2-amino-3-ketobutyrate CoA ligase; Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA.
   
 
 0.514
AMM34714.1
Pfam:pfam11272 Protein of unknown function (DUF3072).
       0.511
AMM34626.1
Putative fatty-acid--CoA ligase; Pfam:pfam00501 AMP-binding enzyme.
  
 0.488
AMM32601.1
Glutamate synthase; Pfam:pfam01645 Conserved region in glutamate synthase.
  
  
 0.472
rplF
50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.
   
  0.467
AMM34310.1
Indigoidine synthase; Pfam:pfam00501 AMP-binding enzyme.
   
 0.464
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
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