STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMM34724.1Putative integral membrane protein; Pfam:pfam09594 Protein of unknown function (DUF2029). (486 aa)    
Predicted Functional Partners:
AMM34723.1
ATP-dependent helicase HrpB; Pfam:pfam04408 Helicase associated domain (HA2).
       0.746
AMM33310.1
Hypothetical protein.
  
     0.659
AMM33952.1
GCN5-related N-acetyltransferase; Pfam:pfam13508 Acetyltransferase (GNAT) domain.
  
     0.613
AMM34725.1
Hypothetical protein.
       0.603
AMM30710.1
Pfam:pfam05258 Protein of unknown function (DUF721).
  
     0.583
AMM33026.1
Membrane protein.
 
     0.538
AMM33960.1
Hypothetical protein; Pfam:pfam13614 AAA domain.
  
     0.526
AMM32314.1
Acetyltransferase; Pfam:pfam13312 Domain of unknown function (DUF4081).
  
     0.521
AMM33887.1
Abortive infection protein; Pfam:pfam02517 CAAX protease self-immunity.
  
     0.521
AMM31198.1
Pfam:pfam04456 Protein of unknown function (DUF503).
  
     0.508
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
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