Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AMM34728.1Pfam:pfam00293 NUDIX domain. (184 aa)    
Predicted Functional Partners:
AMM34729.1
Pfam:pfam03023 MviN-like protein.
       0.832
AMM34727.1
RNA nucleotidyltransferase; Pfam:pfam01743 Poly A polymerase head domain; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
       0.677
AMM34730.1
ABC transporter substrate-binding protein.
 
     0.640
AMM33235.1
Putative lipase/esterase; Pfam:pfam13472 GDSL-like Lipase/Acylhydrolase family.
 
     0.620
AMM33338.1
Pfam:pfam01636 Phosphotransferase enzyme family.
 
     0.569
AMM33734.1
Pfam:pfam00293 NUDIX domain; Belongs to the Nudix hydrolase family.
  
     0.557
AMM34726.1
Phosphoglycerate mutase; Pfam:pfam00300 Histidine phosphatase superfamily (branch 1).
  
    0.557
AMM32700.1
Hypothetical protein.
  
     0.511
AMM34731.1
Thioredoxin reductase; Pfam:pfam07992 Pyridine nucleotide-disulphide oxidoreductase.
     
 0.508
crgA
Septation inhibitor protein; Involved in cell division; Belongs to the CrgA family.
  
     0.468
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
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