STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMM34729.1Pfam:pfam03023 MviN-like protein. (655 aa)    
Predicted Functional Partners:
AMM30908.1
FHA domain containing protein; Pfam:pfam12401 Protein of unknown function (DUF2662).
 
 
 
 0.975
AMM34728.1
Pfam:pfam00293 NUDIX domain.
       0.837
AMM30710.1
Pfam:pfam05258 Protein of unknown function (DUF721).
  
   
 0.780
AMM34730.1
ABC transporter substrate-binding protein.
     0.773
AMM30905.1
Cell elongation-specific peptidoglycan biosynthesis regulator RodA; Pfam:pfam01098 Cell cycle protein; Belongs to the SEDS family.
 
  
 0.761
AMM34727.1
RNA nucleotidyltransferase; Pfam:pfam01743 Poly A polymerase head domain; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
       0.689
AMM32776.1
Pfam:pfam06144 DNA polymerase III, delta subunit.
  
  
 0.645
AMM32077.1
Pfam:pfam04417 Protein of unknown function (DUF501).
  
    0.644
AMM30733.1
Hypothetical protein.
  
   
 0.621
AMM32457.1
Pfam:pfam00498 FHA domain.
 
 
 
 0.587
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.