STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDQ03197.1Cd2+/Zn2+-exporting ATPase. (652 aa)    
Predicted Functional Partners:
SDQ03193.1
DNA-binding transcriptional regulator, ArsR family.
 
  
 0.857
lspA
Signal peptidase II; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.
 
    0.816
SDQ03183.1
Cobalt-zinc-cadmium efflux system protein.
  
  
 0.637
SDQ03188.1
DNA-binding transcriptional regulator, ArsR family.
  
  
 0.621
SDQ03179.1
Protein-disulfide isomerase.
 
 
   0.610
SDQ03169.1
Putative copper resistance protein D.
     
 0.540
SDQ03205.1
Hypothetical protein.
       0.526
SDQ03174.1
Putative membrane protein.
       0.516
SDQ03164.1
Hypothetical protein.
       0.511
SDQ74236.1
Copper chaperone CopZ.
  
 
 0.461
Your Current Organism:
Arthrobacter crystallopoietes
NCBI taxonomy Id: 37928
Other names: A. crystallopoietes, ATCC 15481, CIP 102717, DSM 20117, IFO 14235, JCM 2522, LMG 3819, LMG:3819, NBRC 14235
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.