Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDQ24545.1 | SDQ27568.1 | SAMN04489742_0242 | SAMN04489742_0400 | NAD(P)H dehydrogenase (quinone). | Protein of unknown function. | 0.460 |
SDQ27548.1 | SDQ27568.1 | SAMN04489742_0399 | SAMN04489742_0400 | Hypothetical protein. | Protein of unknown function. | 0.768 |
SDQ27568.1 | SDQ24545.1 | SAMN04489742_0400 | SAMN04489742_0242 | Protein of unknown function. | NAD(P)H dehydrogenase (quinone). | 0.460 |
SDQ27568.1 | SDQ27548.1 | SAMN04489742_0400 | SAMN04489742_0399 | Protein of unknown function. | Hypothetical protein. | 0.768 |
SDQ27568.1 | SDQ75618.1 | SAMN04489742_0400 | SAMN04489742_2436 | Protein of unknown function. | Hypothetical protein. | 0.592 |
SDQ27568.1 | SDQ93960.1 | SAMN04489742_0400 | SAMN04489742_3164 | Protein of unknown function. | P-hydroxybenzoate 3-monooxygenase. | 0.473 |
SDQ27568.1 | SDR29059.1 | SAMN04489742_0400 | SAMN04489742_4666 | Protein of unknown function. | Ferredoxin-NADP reductase. | 0.439 |
SDQ27568.1 | idi | SAMN04489742_0400 | SAMN04489742_1106 | Protein of unknown function. | Isopentenyl-diphosphate delta-isomerase; Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP). | 0.419 |
SDQ75618.1 | SDQ27568.1 | SAMN04489742_2436 | SAMN04489742_0400 | Hypothetical protein. | Protein of unknown function. | 0.592 |
SDQ75618.1 | SDQ93960.1 | SAMN04489742_2436 | SAMN04489742_3164 | Hypothetical protein. | P-hydroxybenzoate 3-monooxygenase. | 0.580 |
SDQ93960.1 | SDQ27568.1 | SAMN04489742_3164 | SAMN04489742_0400 | P-hydroxybenzoate 3-monooxygenase. | Protein of unknown function. | 0.473 |
SDQ93960.1 | SDQ75618.1 | SAMN04489742_3164 | SAMN04489742_2436 | P-hydroxybenzoate 3-monooxygenase. | Hypothetical protein. | 0.580 |
SDQ93960.1 | idi | SAMN04489742_3164 | SAMN04489742_1106 | P-hydroxybenzoate 3-monooxygenase. | Isopentenyl-diphosphate delta-isomerase; Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP). | 0.419 |
SDR29059.1 | SDQ27568.1 | SAMN04489742_4666 | SAMN04489742_0400 | Ferredoxin-NADP reductase. | Protein of unknown function. | 0.439 |
idi | SDQ27568.1 | SAMN04489742_1106 | SAMN04489742_0400 | Isopentenyl-diphosphate delta-isomerase; Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP). | Protein of unknown function. | 0.419 |
idi | SDQ93960.1 | SAMN04489742_1106 | SAMN04489742_3164 | Isopentenyl-diphosphate delta-isomerase; Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP). | P-hydroxybenzoate 3-monooxygenase. | 0.419 |