STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDQ30254.1Hypothetical protein. (1007 aa)    
Predicted Functional Partners:
SDQ28903.1
DNA-binding transcriptional regulator, PucR family.
  
     0.552
SDQ03496.1
Chromosome partitioning protein, ParB family; Belongs to the ParB family.
    
 
 0.541
SDQ65778.1
Chromosome segregation DNA-binding protein; Belongs to the ParB family.
    
 
 0.541
SDQ30234.1
Hypothetical protein.
       0.486
SDQ42061.1
PucR C-terminal helix-turn-helix domain-containing protein.
  
     0.438
SDQ37990.1
Protein of unknown function.
  
     0.417
SDQ73064.1
Hydroxypyruvate isomerase; Belongs to the hyi family.
  
     0.415
Your Current Organism:
Arthrobacter crystallopoietes
NCBI taxonomy Id: 37928
Other names: A. crystallopoietes, ATCC 15481, CIP 102717, DSM 20117, IFO 14235, JCM 2522, LMG 3819, LMG:3819, NBRC 14235
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.