STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDQ30867.1GAF domain-containing protein. (241 aa)    
Predicted Functional Partners:
SDQ30890.1
ANTAR domain-containing protein.
 
    
0.592
SDQ30843.1
Hypothetical protein.
       0.542
SDQ33714.1
Amino acid/amide ABC transporter substrate-binding protein, HAAT family; Non-canonical start codon; manually curated.
  
 
 0.534
SDQ67836.1
ABC-type branched-chain amino acid transport system, substrate-binding protein.
  
 
 0.534
SDR19213.1
4'-phosphopantetheinyl transferase; Belongs to the P-Pant transferase superfamily.
  
     0.504
SDQ49255.1
LytR cell envelope-related transcriptional attenuator.
  
     0.443
SDR16208.1
Glutamate synthase (NADH) large subunit.
  
  
 0.442
SDQ57367.1
Hypothetical protein.
  
     0.438
SDQ30910.1
Hypothetical protein.
       0.421
SDR15709.1
SSU ribosomal protein S1P.
  
    0.414
Your Current Organism:
Arthrobacter crystallopoietes
NCBI taxonomy Id: 37928
Other names: A. crystallopoietes, ATCC 15481, CIP 102717, DSM 20117, IFO 14235, JCM 2522, LMG 3819, LMG:3819, NBRC 14235
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