STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDQ32958.1Cell envelope-related function transcriptional attenuator common domain-containing protein. (557 aa)    
Predicted Functional Partners:
purK
5-(carboxyamino)imidazole ribonucleotide synthase; Catalyzes the ATP-dependent conversion of 5-aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5-carboxyaminoimidazole ribonucleotide (N5-CAIR).
 
     0.853
purE
5-(carboxyamino)imidazole ribonucleotide mutase; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).
       0.830
SDQ33000.1
Lipid II:glycine glycyltransferase (Peptidoglycan interpeptide bridge formation enzyme).
 
   
 0.682
SDQ32982.1
Mannose-6-phosphate isomerase, type 1.
       0.655
SDQ35241.1
Hypothetical protein.
  
     0.607
SDR21118.1
Glyoxalase-like domain-containing protein.
  
     0.594
SDQ32900.1
Putative flippase GtrA (transmembrane translocase of bactoprenol-linked glucose).
       0.573
rpmF
LSU ribosomal protein L32P; Belongs to the bacterial ribosomal protein bL32 family.
 
    0.529
SDR20797.1
Glycosyltransferase involved in cell wall bisynthesis.
 
   
 0.517
SDQ33040.1
Protein of unknown function.
  
     0.503
Your Current Organism:
Arthrobacter crystallopoietes
NCBI taxonomy Id: 37928
Other names: A. crystallopoietes, ATCC 15481, CIP 102717, DSM 20117, IFO 14235, JCM 2522, LMG 3819, LMG:3819, NBRC 14235
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