STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDQ36151.1Uncharacterized integral membrane protein. (158 aa)    
Predicted Functional Partners:
SDQ44890.1
Protein of unknown function.
  
     0.654
SDQ44911.1
Protein of unknown function.
  
     0.642
SDQ44938.1
Uncharacterized protein YPO0396.
  
     0.613
SDR11700.1
Protein of unknown function.
   
    0.499
SDQ33695.1
HNH endonuclease.
  
     0.421
SDQ80517.1
HNH endonuclease.
  
     0.419
SDR08261.1
HNH endonuclease.
  
     0.416
SDQ90702.1
HNH endonuclease.
  
     0.415
SDQ45988.1
HNH endonuclease.
  
     0.411
SDQ36995.1
HNH endonuclease.
  
     0.409
Your Current Organism:
Arthrobacter crystallopoietes
NCBI taxonomy Id: 37928
Other names: A. crystallopoietes, ATCC 15481, CIP 102717, DSM 20117, IFO 14235, JCM 2522, LMG 3819, LMG:3819, NBRC 14235
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