STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDQ36611.1N-carbamoylputrescine amidase. (341 aa)    
Predicted Functional Partners:
SDQ36633.1
Agmatine deiminase; Belongs to the agmatine deiminase family.
 
 0.998
SDQ29416.1
Agmatinase; Belongs to the arginase family.
  
 0.931
SDQ47426.1
Agmatinase; Belongs to the arginase family.
  
 0.931
SDQ36227.1
Putrescine oxidase.
  
 
 0.909
SDQ36660.1
Amino acid transporter.
       0.773
SDQ36582.1
Betaine-aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.520
SDQ47740.1
Sarcosine oxidase subunit alpha.
   
 
 0.412
Your Current Organism:
Arthrobacter crystallopoietes
NCBI taxonomy Id: 37928
Other names: A. crystallopoietes, ATCC 15481, CIP 102717, DSM 20117, IFO 14235, JCM 2522, LMG 3819, LMG:3819, NBRC 14235
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