Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDQ42956.1 | SDQ42981.1 | SAMN04489742_1082 | SAMN04489742_1083 | Hypothetical protein. | Helix-turn-helix domain-containing protein. | 0.890 |
SDQ42956.1 | SDQ43008.1 | SAMN04489742_1082 | SAMN04489742_1084 | Hypothetical protein. | Predicted arabinose efflux permease, MFS family. | 0.450 |
SDQ42956.1 | trpS | SAMN04489742_1082 | SAMN04489742_0730 | Hypothetical protein. | tryptophanyl-tRNA synthetase; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.469 |
SDQ42981.1 | SDQ42956.1 | SAMN04489742_1083 | SAMN04489742_1082 | Helix-turn-helix domain-containing protein. | Hypothetical protein. | 0.890 |
SDQ42981.1 | SDQ43008.1 | SAMN04489742_1083 | SAMN04489742_1084 | Helix-turn-helix domain-containing protein. | Predicted arabinose efflux permease, MFS family. | 0.620 |
SDQ43008.1 | SDQ42956.1 | SAMN04489742_1084 | SAMN04489742_1082 | Predicted arabinose efflux permease, MFS family. | Hypothetical protein. | 0.450 |
SDQ43008.1 | SDQ42981.1 | SAMN04489742_1084 | SAMN04489742_1083 | Predicted arabinose efflux permease, MFS family. | Helix-turn-helix domain-containing protein. | 0.620 |
trpS | SDQ42956.1 | SAMN04489742_0730 | SAMN04489742_1082 | tryptophanyl-tRNA synthetase; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family. | Hypothetical protein. | 0.469 |