STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDQ45841.1GAF domain-containing protein. (244 aa)    
Predicted Functional Partners:
SDQ45867.1
Aconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate.
     
 0.713
SDQ33714.1
Amino acid/amide ABC transporter substrate-binding protein, HAAT family; Non-canonical start codon; manually curated.
  
 
 0.534
SDQ67836.1
ABC-type branched-chain amino acid transport system, substrate-binding protein.
  
 
 0.534
SDR19213.1
4'-phosphopantetheinyl transferase; Belongs to the P-Pant transferase superfamily.
  
     0.446
SDQ45817.1
Protein of unknown function.
       0.444
SDR16208.1
Glutamate synthase (NADH) large subunit.
  
  
 0.442
SDQ45892.1
Hypothetical protein.
       0.428
SDR21144.1
TIGR03086 family protein.
  
     0.427
SDQ57367.1
Hypothetical protein.
  
     0.420
SDR15709.1
SSU ribosomal protein S1P.
  
    0.414
Your Current Organism:
Arthrobacter crystallopoietes
NCBI taxonomy Id: 37928
Other names: A. crystallopoietes, ATCC 15481, CIP 102717, DSM 20117, IFO 14235, JCM 2522, LMG 3819, LMG:3819, NBRC 14235
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