STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDQ49071.1Two-component system, OmpR family, sensor kinase. (484 aa)    
Predicted Functional Partners:
SDQ49040.1
Two-component system, OmpR family, response regulator.
 
 0.975
SDQ27220.1
Serine/threonine protein kinase.
  
 
 0.875
SDR00052.1
Two-component system, OmpR family, response regulator MtrA.
 
 0.875
SDQ39419.1
Two-component system, OmpR family, response regulator.
 
 0.867
SDQ51167.1
Two-component system, OmpR family, response regulator RegX3.
 
 0.867
SDQ97364.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
 
 0.835
SDQ31053.1
Two-component system, OmpR family, KDP operon response regulator KdpE.
 
 0.826
SDQ25415.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
 
 0.794
SDQ52075.1
Transcriptional regulatory protein, C terminal.
 
 
 0.752
SDQ93347.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
 
 
 0.696
Your Current Organism:
Arthrobacter crystallopoietes
NCBI taxonomy Id: 37928
Other names: A. crystallopoietes, ATCC 15481, CIP 102717, DSM 20117, IFO 14235, JCM 2522, LMG 3819, LMG:3819, NBRC 14235
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