STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDQ49359.1Uncharacterized membrane protein YjjP, DUF1212 family. (573 aa)    
Predicted Functional Partners:
SDQ32639.1
Integral membrane protein TIGR01906.
  
     0.725
SDR02581.1
Protein of unknown function.
  
     0.640
SDQ65288.1
Hypothetical protein.
  
     0.621
SDR16705.1
Alpha/beta hydrolase family protein.
  
     0.540
SDQ89046.1
Hypothetical protein.
  
     0.533
SDQ32815.1
Hypothetical protein.
  
     0.525
SDR11981.1
Hypothetical protein.
 
     0.487
SDQ49387.1
Protein-S-isoprenylcysteine O-methyltransferase Ste14.
       0.486
SDR00078.1
Two-component system, OmpR family, sensor histidine kinase MtrB.
 
   
 0.461
SDR16294.1
Trp region conserved hypothetical membrane protein.
  
     0.447
Your Current Organism:
Arthrobacter crystallopoietes
NCBI taxonomy Id: 37928
Other names: A. crystallopoietes, ATCC 15481, CIP 102717, DSM 20117, IFO 14235, JCM 2522, LMG 3819, LMG:3819, NBRC 14235
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