STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDQ49590.1Sugar phosphate isomerase/epimerase. (289 aa)    
Predicted Functional Partners:
SDQ49564.1
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit.
 
     0.944
SDQ49617.1
Predicted dehydrogenase.
 
  
 0.886
SDQ69140.1
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit.
 
     0.765
SDQ42277.1
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit.
 
     0.752
SDQ26994.1
Sugar phosphate isomerase/epimerase.
  
     0.747
SDQ26923.1
Sugar phosphate isomerase/epimerase.
  
     0.731
aroE
Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).
 
  
 0.716
iolG
Myo-inositol 2-dehydrogenase; Involved in the oxidation of myo-inositol (MI) to 2-keto-myo- inositol (2KMI or 2-inosose).
 
  
 0.705
SDQ69256.1
3-oxosteroid 1-dehydrogenase.
 
     0.677
SDQ26483.1
Myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase.
  
  
 0.653
Your Current Organism:
Arthrobacter crystallopoietes
NCBI taxonomy Id: 37928
Other names: A. crystallopoietes, ATCC 15481, CIP 102717, DSM 20117, IFO 14235, JCM 2522, LMG 3819, LMG:3819, NBRC 14235
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