STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDQ54561.1Amino acid synthesis. (209 aa)    
Predicted Functional Partners:
SDQ54611.1
Pimeloyl-ACP methyl ester carboxylesterase.
 
     0.934
SDQ54538.1
Luciferase; Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase).
 
     0.925
SDQ54583.1
Amino acid synthesis.
 
    
0.842
SDQ54637.1
Aldehyde dehydrogenase (acceptor).
 
     0.839
SDQ54658.1
4-oxalocrotonate tautomerase.
       0.808
SDQ54682.1
Hypothetical protein.
       0.762
SDQ54513.1
DNA-binding transcriptional regulator, GntR family.
 
     0.691
SDQ54487.1
Conserved hypothetical protein, steroid delta-isomerase-related.
 
     0.679
SDR31033.1
Monooxygenase; Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase).
 
     0.679
SDR29873.1
Hypothetical protein; Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase).
 
     0.627
Your Current Organism:
Arthrobacter crystallopoietes
NCBI taxonomy Id: 37928
Other names: A. crystallopoietes, ATCC 15481, CIP 102717, DSM 20117, IFO 14235, JCM 2522, LMG 3819, LMG:3819, NBRC 14235
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