STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDQ55456.1Nucleoside recognition GATE domain-containing membrane protein YjiH. (438 aa)    
Predicted Functional Partners:
SDQ55434.1
Putative SOS response-associated peptidase YedK; Belongs to the SOS response-associated peptidase family.
       0.610
SDQ55479.1
DNA-binding transcriptional regulator, IclR family.
       0.538
SDQ86066.1
Short-chain fatty acids transporter.
  
     0.475
SDQ59115.1
Amino acid transporter.
  
     0.417
SDQ90030.1
Carbon monoxide dehydrogenase subunit G.
  
     0.403
Your Current Organism:
Arthrobacter crystallopoietes
NCBI taxonomy Id: 37928
Other names: A. crystallopoietes, ATCC 15481, CIP 102717, DSM 20117, IFO 14235, JCM 2522, LMG 3819, LMG:3819, NBRC 14235
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