STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDQ57489.1Osmoprotectant transport system ATP-binding protein. (420 aa)    
Predicted Functional Partners:
SDQ57444.1
Osmoprotectant transport system substrate-binding protein.
 
 0.996
SDQ57516.1
Osmoprotectant transport system permease protein.
 0.996
SDQ57469.1
Osmoprotectant transport system permease protein.
 0.995
SDQ97483.1
Osmoprotectant transport system permease protein.
 
 0.987
SDQ97528.1
Osmoprotectant transport system substrate-binding protein.
 
 0.984
SDQ97505.1
Osmoprotectant transport system permease protein.
 
 
 0.928
SDQ97460.1
Osmoprotectant transport system ATP-binding protein.
  
  
 
0.908
SDQ31275.1
ABC-2 type transport system ATP-binding protein.
 
     
0.899
SDQ73910.1
ABC-2 type transport system ATP-binding protein.
 
    
0.877
SDQ81915.1
ABC-2 type transport system ATP-binding protein.
 
    
0.773
Your Current Organism:
Arthrobacter crystallopoietes
NCBI taxonomy Id: 37928
Other names: A. crystallopoietes, ATCC 15481, CIP 102717, DSM 20117, IFO 14235, JCM 2522, LMG 3819, LMG:3819, NBRC 14235
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.