STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDQ58948.1D-amino-acid dehydrogenase. (408 aa)    
Predicted Functional Partners:
SDQ46542.1
D-amino acid dehydrogenase small subunit.
  
  
 
0.908
SDQ49511.1
4-hydroxyphenylpyruvate dioxygenase.
   
 
 0.908
SDQ58719.1
FAD dependent oxidoreductase.
  
  
 
0.906
hisC
Histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
   
 
 0.903
hisC-2
Histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
   
 
 0.903
SDQ41464.1
Aspartate aminotransferase.
    
 0.901
SDQ93603.1
Aspartate/methionine/tyrosine aminotransferase.
    
 0.901
SDQ47740.1
Sarcosine oxidase subunit alpha.
  
 
 0.766
SDQ58924.1
2-iminobutanoate/2-iminopropanoate deaminase.
  
    0.679
SDQ47769.1
Sarcosine oxidase subunit delta.
  
 
 0.466
Your Current Organism:
Arthrobacter crystallopoietes
NCBI taxonomy Id: 37928
Other names: A. crystallopoietes, ATCC 15481, CIP 102717, DSM 20117, IFO 14235, JCM 2522, LMG 3819, LMG:3819, NBRC 14235
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