STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDQ64245.13-hydroxypropanoate dehydrogenase. (209 aa)    
Predicted Functional Partners:
SDQ57516.1
Osmoprotectant transport system permease protein.
      0.601
SDQ64271.1
Nucleobase:cation symporter-2, NCS2 family.
  
  
 0.566
SDR16208.1
Glutamate synthase (NADH) large subunit.
     
 0.536
SDQ31250.1
ABC-2 type transport system permease protein.
  
  
 0.488
SDQ32190.1
ABC-2 type transport system permease protein.
  
  
 0.488
SDQ34355.1
Lipooligosaccharide transport system permease protein.
  
  
 0.488
SDQ44836.1
ABC-2 type transport system permease protein.
  
  
 0.488
SDR15135.1
ABC-2 type transport system permease protein.
  
  
 0.488
SDQ99855.1
CAAX protease self-immunity.
  
  
 0.470
SDR21131.1
Hypothetical protein.
  
  
 0.470
Your Current Organism:
Arthrobacter crystallopoietes
NCBI taxonomy Id: 37928
Other names: A. crystallopoietes, ATCC 15481, CIP 102717, DSM 20117, IFO 14235, JCM 2522, LMG 3819, LMG:3819, NBRC 14235
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