STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDQ80752.1Putative Holin-X, holin superfamily III. (149 aa)    
Predicted Functional Partners:
SDQ80728.1
Protein of unknown function.
 
     0.950
SDQ80775.1
Hypothetical protein.
 
     0.950
SDQ80797.1
Membrane protein.
 
     0.865
SDQ50887.1
Protein of unknown function.
 
     0.791
SDQ50830.1
Hypothetical protein.
 
     0.790
SDQ50804.1
Membrane protein.
 
     0.626
SDQ84527.1
Membrane protein.
 
     0.584
Your Current Organism:
Arthrobacter crystallopoietes
NCBI taxonomy Id: 37928
Other names: A. crystallopoietes, ATCC 15481, CIP 102717, DSM 20117, IFO 14235, JCM 2522, LMG 3819, LMG:3819, NBRC 14235
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.