STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDQ81183.1DNA-binding transcriptional regulator, ArsR family. (113 aa)    
Predicted Functional Partners:
SDQ81158.1
Uncharacterized conserved protein YndB, AHSA1/START domain.
 
    0.944
SDR06641.1
Uncharacterized conserved protein YndB, AHSA1/START domain.
 
    0.718
SDQ38367.1
Uncharacterized conserved protein YndB, AHSA1/START domain.
    0.713
SDQ38426.1
Uncharacterized conserved protein YndB, AHSA1/START domain.
    0.683
SDQ59316.1
Uncharacterized conserved protein YndB, AHSA1/START domain.
 
    0.575
SDQ81085.1
Uncharacterized conserved protein YndB, AHSA1/START domain.
 
    0.471
SDQ81207.1
Zinc carboxypeptidase.
       0.470
Your Current Organism:
Arthrobacter crystallopoietes
NCBI taxonomy Id: 37928
Other names: A. crystallopoietes, ATCC 15481, CIP 102717, DSM 20117, IFO 14235, JCM 2522, LMG 3819, LMG:3819, NBRC 14235
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.