STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDQ84447.1Hypothetical protein. (266 aa)    
Predicted Functional Partners:
SDQ84866.1
NADP-dependent 3-hydroxy acid dehydrogenase YdfG; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
     0.658
SDQ84416.1
Alanine-synthesizing transaminase.
  
 
 0.578
SDQ84476.1
Protein of unknown function.
     
 0.525
SDR08764.1
3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
 
 
 0.437
SDQ77875.1
Hypothetical protein.
  
 
 0.436
SDQ03452.1
Copper chaperone CopZ.
  
 
 0.434
SDQ62220.1
1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family.
  
  
 0.434
SDR06605.1
Hypothetical protein.
  
 
 0.433
SDR08818.1
[acyl-carrier-protein] S-malonyltransferase.
  
 
 0.432
SDR14349.1
Hypothetical protein.
  
  
 0.419
Your Current Organism:
Arthrobacter crystallopoietes
NCBI taxonomy Id: 37928
Other names: A. crystallopoietes, ATCC 15481, CIP 102717, DSM 20117, IFO 14235, JCM 2522, LMG 3819, LMG:3819, NBRC 14235
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