STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDQ87335.1Energy-coupling factor transport system permease protein. (265 aa)    
Predicted Functional Partners:
SDQ87313.1
Energy-coupling factor transport system ATP-binding protein.
 
 0.997
SDQ87286.1
Energy-coupling factor transport system substrate-specific component.
 
  
 0.977
SDR14916.1
Biotin transport system substrate-specific component.
 
 0.952
SDR16868.1
Energy-coupling factor transport system permease protein.
  
  
  0.935
SDR14932.1
Biotin transport system ATP-binding protein.
  
 
 0.860
SDR16852.1
Energy-coupling factor transport system ATP-binding protein.
 
 0.802
SDQ86717.1
Hypothetical protein.
  
    0.638
SDR10316.1
Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase.
 
  
 0.593
SDQ87466.1
Cardiolipin synthase; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol; Belongs to the phospholipase D family. Cardiolipin synthase subfamily.
 
  
 0.578
SDQ55085.1
Sulfide:quinone oxidoreductase.
     
 0.576
Your Current Organism:
Arthrobacter crystallopoietes
NCBI taxonomy Id: 37928
Other names: A. crystallopoietes, ATCC 15481, CIP 102717, DSM 20117, IFO 14235, JCM 2522, LMG 3819, LMG:3819, NBRC 14235
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