STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDQ90437.1ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA. (331 aa)    
Predicted Functional Partners:
SDQ90463.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB.
 0.999
SDQ90491.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaC.
  
  0.998
SDQ90514.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaD.
 
 
 0.995
SDQ90544.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
 
 0.995
SDQ90358.1
phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).
 
 
 0.986
SDQ67727.1
acyl-CoA thioesterase.
 
 
 0.979
SDQ76710.1
acyl-CoA thioesterase.
 
 
 0.979
SDQ90386.1
acyl-CoA thioesterase.
 
 
 0.979
SDQ90569.1
Enoyl-CoA hydratase/carnithine racemase.
  
 
 0.962
SDQ68033.1
Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 
 0.914
Your Current Organism:
Arthrobacter crystallopoietes
NCBI taxonomy Id: 37928
Other names: A. crystallopoietes, ATCC 15481, CIP 102717, DSM 20117, IFO 14235, JCM 2522, LMG 3819, LMG:3819, NBRC 14235
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